* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/SQMtools.Rcheck’
* using R Under development (unstable) (2023-08-31 r85038)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)
    GNU Fortran (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)
* running under: Fedora Linux 38 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘SQMtools/DESCRIPTION’ ... OK
* this is package ‘SQMtools’ version ‘1.6.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SQMtools’ can be installed ... [21s/21s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s/11s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [17s/17s] OK
* checking examples with --run-donttest ... ERROR
Running examples in ‘SQMtools-Ex.R’ failed
The error most likely occurred in:

> ### Name: exportKrona
> ### Title: Export the taxonomy of a SQM object into a Krona Chart
> ### Aliases: exportKrona
> 
> ### ** Examples
> 
> ## No test: 
> data(Hadza)
> exportKrona(Hadza)
Warning in system("ktImportText", ignore.stdout = TRUE, ignore.stderr = TRUE) :
  error in running command
Error in exportKrona(Hadza) : 
  ktImportText (from KronaTools) is not present in your PATH. KronaTools can be downloaded from https://github.com/marbl/Krona
Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/SQMtools.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:16.37, 70.58 + 5.46