* using log directory ‘/data/gannet/ripley/R/packages/tests-ATLAS/lacunaritycovariance.Rcheck’ * using R Under development (unstable) (2024-04-16 r86435) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘lacunaritycovariance/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘lacunaritycovariance’ version ‘1.1-7’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘lacunaritycovariance’ can be installed ... [15s/17s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/24s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [21s/25s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘run_testthattests.R’ [80s/97s] [80s/97s] ERROR Running the tests in ‘tests/run_testthattests.R’ failed. Complete output: > library(testthat) > #library(lacunaritycovariance) > test_check("lacunaritycovariance") Loading required package: lacunaritycovariance Loading required package: spatstat Loading required package: spatstat.data Loading required package: spatstat.geom spatstat.geom 3.2-9 Loading required package: spatstat.random spatstat.random 3.2-3 Loading required package: spatstat.explore Loading required package: nlme spatstat.explore 3.2-7 Loading required package: spatstat.model Loading required package: rpart spatstat.model 3.2-11 Loading required package: spatstat.linnet spatstat.linnet 3.1-5 spatstat 3.0-8 For an introduction to spatstat, type 'beginner' [ FAIL 1 | WARN 0 | SKIP 14 | PASS 123 ] ══ Skipped tests (14) ══════════════════════════════════════════════════════════ • On CRAN (14): 'test-covar.R:30:3', 'test-gbl.R:67:3', 'test-gbl.R:136:3', 'test-gbl.R:160:3', 'test-gbl.R:166:3', 'test-gbl.R:190:3', 'test-innerprod.R:26:3', 'test-secondorderprops.R:8:3', 'test-secondorderprops.R:33:3', 'test-secondorderprops.R:70:3', 'test-secondorderprops.R:88:3', 'test-secondorderprops.R:96:3', 'test-secondorderprops.R:105:3', 'test-secondorderprops.R:121:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-rbpto.R:39:3'): rbpto generates simulations that match covariance for big window ── mean(abs(cvc.diff)) is not strictly less than cp * cvcreltol * 1.5. Difference: 0.0234 [ FAIL 1 | WARN 0 | SKIP 14 | PASS 123 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [24s/30s] OK * checking PDF version of manual ... [11s/18s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-ATLAS/lacunaritycovariance.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 5:05.92, 227.46 + 19.70