* using log directory ‘/Users/ripley/R/packages/tests-devel/censReg.Rcheck’ * using R Under development (unstable) (2024-04-27 r86487) * using platform: aarch64-apple-darwin23.4.0 * R was compiled by Apple clang version 15.0.0 (clang-1500.3.9.4) GNU Fortran (GCC) 12.2.0 * running under: macOS Sonoma 14.4.1 * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘censReg/DESCRIPTION’ ... OK * this is package ‘censReg’ version ‘0.5-36’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘censReg’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘censRegFail.R’ Comparing ‘censRegFail.Rout’ to ‘censRegFail.Rout.save’ ... OK Running ‘censRegPanelLargerTest.R’ Comparing ‘censRegPanelLargerTest.Rout’ to ‘censRegPanelLargerTest.Rout.save’ ... OK Running ‘censRegPanelTest.R’ Comparing ‘censRegPanelTest.Rout’ to ‘censRegPanelTest.Rout.save’ ...309,320c309 < comparing method 'Vcov' ... different < [1] "Mean relative difference: 0.52531" < new: < (Intercept) logSigmaMu logSigmaNu < (Intercept) 0.0833352 1.9454e-03 -0.008585 < logSigmaMu 0.0019454 -1.9308e+08 0.068139 < logSigmaNu -0.0085850 6.8139e-02 0.014443 < saved: < (Intercept) logSigmaMu logSigmaNu < (Intercept) 0.083335 -2.5517e-02 -0.008585 < logSigmaMu -0.025517 -2.9451e+08 0.062749 < logSigmaNu -0.008585 6.2749e-02 0.014443 --- > comparing method 'Vcov' ... OK Running ‘censRegTest.R’ Comparing ‘censRegTest.Rout’ to ‘censRegTest.Rout.save’ ... OK OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: OK 34.11 real 27.78 user 5.49 sys