* using log directory ‘/Users/ripley/R/packages/tests-devel/DivInsight.Rcheck’
* using R Under development (unstable) (2023-08-23 r85001)
* using platform: aarch64-apple-darwin22.6.0
* R was compiled by
    Apple clang version 15.0.0 (clang-1500.0.40.1)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.5.1
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘DivInsight/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘DivInsight’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘DivInsight’ can be installed ... [28s/28s] OK
* checking installed package size ... NOTE
  installed size is  8.8Mb
  sub-directories of 1Mb or more:
    data   7.6Mb
    doc    1.1Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [13s/13s] NOTE
  Note: found 871164 marked UTF-8 strings
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [12s/12s] ERROR
Running examples in ‘DivInsight-Ex.R’ failed
The error most likely occurred in:

> ### Name: site_regroup
> ### Title: Regroup Sites
> ### Aliases: site_regroup
> 
> ### ** Examples
> 
> # regroup the sites with a group radius of 5km instead of 20km
> Colombia_Caquetá_dataframe <- subset(Colombia, stateProvince == "Caquetá")
> 
> clusterised_Caquetá <- clusterise_sites(dataframe = Colombia_Caquetá_dataframe,
+                                        cluster_min_length = 30,
+                                        group_radius = 20000
+ )
> 
> print(clusterised_Caquetá[[2]])
   longitude  latitude site_group       date
1  -75.54658  1.558959          1 2008-06-01
2  -75.81619  1.339552          2 2008-06-01
3  -75.78822  1.289720          2 2016-03-08
4  -75.78894  1.267924          2 2019-02-08
5  -75.65327  1.441539          3 2016-03-09
6  -75.66336  1.456000          3 2016-03-16
7  -75.65286  1.441330          3 2019-01-24
8  -75.65567  1.439890          3 2019-01-25
9  -75.65288  1.385920          3 2019-02-06
10 -75.97152  1.194183          4 2016-03-15
11 -75.61600  1.709897          5 2016-03-22
12 -75.61369  1.716690          5 2016-03-29
13 -75.63117  1.678451          5 2016-03-30
14 -75.63488  1.651888          5 2016-04-13
15 -75.61261  1.717140          5 2018-12-17
16 -75.65950  1.744000          5 2019-01-21
17 -75.59994  1.707670          5 2019-01-23
18 -75.63404  1.657868          5 2019-02-18
19 -75.77772  1.438032          7 2016-05-13
20 -75.76399  1.431014          7 2016-05-19
21 -75.75257  1.403800          7 2018-11-07
22 -75.86772  1.475750          7 2018-11-27
23 -75.74022  1.509550          7 2018-11-28
24 -75.80704  1.469540          7 2018-12-12
25 -75.81220  1.510290          7 2018-12-14
26 -75.88993  1.490180          7 2019-01-23
27 -75.90423  1.688207          8 2017-01-25
28 -75.90526  1.629135          8 2017-01-28
29      -Inf 90.000000          8 2017-01-30
30 -75.01101  1.317384         12 2018-12-04
31 -75.00592  1.321170         12 2019-02-14
> 
> clusterised_Caquetá_5km_sites <- site_regroup(
+ 
+  clusterised_object = clusterised_Caquetá,
+  regroup_radius = 5000
+ 
+ )
Error in .pointsToMatrix(x) : longitude < -360
Calls: site_regroup -> distm -> .pointsToMatrix
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... [58s/62s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR, 2 NOTEs
See
  ‘/Users/ripley/R/packages/tests-devel/DivInsight.Rcheck/00check.log’
for details.

      163.52 real       135.31 user        19.90 sys