* using log directory ‘/data/gannet/ripley/R/packages/tests-LENGTH1/vmd.Rcheck’
* using R Under development (unstable) (2022-04-26 r82260)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘vmd/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘vmd’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘vmd’ can be installed ... [12s/42s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s/21s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking LazyData ... NOTE
  'LazyData' is specified without a 'data' directory
* checking examples ... ERROR
Running examples in ‘vmd-Ex.R’ failed
The error most likely occurred in:

> ### Name: vmd
> ### Title: Create VMD Object
> ### Aliases: R6Vmd as.data.frame.vmd plot.vmd vmd
> ### Keywords: datasets
> 
> ### ** Examples
> 
> x = seq(-2*pi,2*pi,length.out=1000)
> signal = cos(x)
> v = vmd(signal,DC=FALSE,tol=1e-3)
 ----------- FAILURE REPORT -------------- 
 --- failure: length > 1 in coercion to logical ---
 --- srcref --- 
: 
 --- package (from environment) --- 
vmd
 --- call from context --- 
self$checkNotNullOrNA(valid, objnm = objnm)
 --- call from argument --- 
is.null(x) || is.na(x)
 --- R stacktrace ---
where 1: self$checkNotNullOrNA(valid, objnm = objnm)
where 2: self$checkIsIn(op, c("==", ">", "<", ">=", "<="))
where 3: private$check$checkLength(signal, 2, op = ">=")
where 4: self$setSignal(signal)
where 5: initialize(...)
where 6: (function (...) 
{
    inherit <- get_inherit()
    if (!is.null(inherit)) {
        if (!inherits(inherit, "R6ClassGenerator")) 
            stop("`inherit` must be a R6ClassGenerator.")
        if (!identical(portable, inherit$portable)) 
            stop("Sub and superclass must both be portable or non-portable.")
        recursive_merge <- function(obj, which) {
            if (is.null(obj)) 
                return(NULL)
            merge_vectors(recursive_merge(obj$get_inherit(), 
                which), obj[[which]])
        }
        public_fields <- merge_vectors(recursive_merge(inherit, 
            "public_fields"), public_fields)
        private_fields <- merge_vectors(recursive_merge(inherit, 
            "private_fields"), private_fields)
    }
    if (class) {
        classes <- c(classname, get_superclassnames(inherit), 
            "R6")
    }
    else {
        classes <- NULL
    }
    has_priv <- has_private()
    if (portable) {
        if (has_priv) 
            private_bind_env <- new.env(parent = emptyenv(), 
                hash = FALSE)
        else private_bind_env <- NULL
        public_bind_env <- new.env(parent = emptyenv(), hash = FALSE)
        enclos_env <- new.env(parent = parent_env, hash = FALSE)
    }
    else {
        if (has_priv) {
            private_bind_env <- new.env(parent = parent_env, 
                hash = FALSE)
            public_bind_env <- new.env(parent = private_bind_env, 
                hash = FALSE)
        }
        else {
            private_bind_env <- NULL
            public_bind_env <- new.env(parent = parent_env, hash = FALSE)
        }
        enclos_env <- public_bind_env
    }
    enclos_env$self <- public_bind_env
    if (has_priv) 
        enclos_env$private <- private_bind_env
    public_methods <- assign_func_envs(public_methods, enclos_env)
    if (has_priv) 
        private_methods <- assign_func_envs(private_methods, 
            enclos_env)
    if (!is.null(active)) 
        active <- assign_func_envs(active, enclos_env)
    if (length(debug_names) > 0) {
        lapply(public_methods[names(public_methods) %in% debug_names], 
            base::debug)
        lapply(private_methods[names(private_methods) %in% debug_names], 
            base::debug)
        lapply(active[names(active) %in% debug_names], base::debug)
    }
    if (!is.null(inherit)) {
        if (portable) {
            super_struct <- create_super_env(inherit, public_bind_env, 
                private_bind_env, portable = TRUE, cloneable = cloneable)
        }
        else {
            super_struct <- create_super_env(inherit, public_bind_env, 
                portable = FALSE, cloneable = cloneable)
        }
        enclos_env$super <- super_struct$bind_env
        public_methods <- merge_vectors(super_struct$public_methods, 
            public_methods)
        private_methods <- merge_vectors(super_struct$private_methods, 
            private_methods)
        active <- merge_vectors(super_struct$active, active)
    }
    list2env2(public_methods, envir = public_bind_env)
    list2env2(public_fields, envir = public_bind_env)
    if (has_priv) {
        list2env2(private_methods, envir = private_bind_env)
        list2env2(private_fields, envir = private_bind_env)
    }
    if (!is.null(active)) {
        for (name in names(active)) {
            makeActiveBinding(name, active[[name]], public_bind_env)
        }
        enclos_env$.__active__ <- active
    }
    public_bind_env$.__enclos_env__ <- enclos_env
    if (lock_objects) {
        if (has_priv) 
            lockEnvironment(private_bind_env)
        lockEnvironment(public_bind_env)
    }
    if (has_priv) {
        for (name in names(private_methods)) lockBinding(name, 
            private_bind_env)
    }
    for (name in names(public_methods)) lockBinding(name, public_bind_env)
    class(public_bind_env) <- classes
    initialize <- .subset2(public_bind_env, "initialize")
    if (is.function(initialize)) {
        initialize(...)
    }
    else if (length(list(...)) != 0) {
        stop("Called new() with arguments, but there is no initialize method.")
    }
    if (is.function(.subset2(public_bind_env, "finalize"))) {
        finalizer_wrapper <- function(e) {
            .subset2(e, "finalize")()
        }
        environment(finalizer_wrapper) <- baseenv()
        reg.finalizer(public_bind_env, finalizer_wrapper, onexit = TRUE)
    }
    if (has_priv) {
        if (is.function(.subset2(private_bind_env, "finalize"))) {
            finalizer_wrapper <- function(e) {
                .subset2(e, ".__enclos_env__")$private$finalize()
            }
            environment(finalizer_wrapper) <- baseenv()
            reg.finalizer(public_bind_env, finalizer_wrapper, 
                onexit = TRUE)
        }
    }
    public_bind_env
})(signal = c(1, 0.999920886057125, 0.999683556746534, 0.99928804962034, 
0.998734427258801, 0.998022777260411, 0.997153212228046, 0.996125869751143, 
0.994940912383929, 0.993598527619703, 0.992098927861168, 0.990442350386824, 
0.988629057313423, 0.986659335554492, 0.984533496774942, 0.982251877341748, 
0.979814838270729, 0.977222765169426, 0.974476068176083, 0.97157518189476, 
0.96852056532656, 0.965312701797003, 0.961952098879555, 0.958439288315309, 
0.954774825928853, 0.950959291540325, 0.946993288873663, 0.942877445461084, 
0.938612412543789, 0.93419886496892, 0.929637501082777, 0.924929042620325, 
0.920074234590991, 0.915073845160786, 0.909928665530757, 0.904639509811798, 
0.899207214895837, 0.893632640323412, 0.887916668147673, 0.882060202794811, 
0.876064170920958, 0.86992952126556, 0.863657224501261, 0.857248273080317, 
0.850703681077561, 0.84402448402995, 0.83721173877271, 0.83026652327212, 
0.823189936454945, 0.815983098034554, 0.808647148333755, 0.801183248104357, 
0.793592578343515, 0.785876340106855, 0.77803575431844, 0.770072061577581, 
0.761986521962545, 0.753780414831169, 0.745455038618436, 0.737011710631021, 
0.728451766838861, 0.719776561663763, 0.710987467765102, 0.702085875822622, 
0.693073194316397, 0.683950849303966, 0.674720284194693, 0.665382959521379, 
0.655940352709168, 0.646393957841769, 0.63674528542506, 0.626995862148079, 
0.617147230641455, 0.607200949233331, 0.597158591702786, 0.587021747030818, 
0.57679201914893, 0.566471026685334, 0.556060402708847, 0.545561794470492, 
0.534976863142852, 0.524307283557232, 0.513554743938652, 0.502720945638721, 
0.491807602866442, 0.480816442416964, 0.469749203398371, 0.458607636956491, 
0.447393505997827, 0.436108584910611, 0.424754659284048, 0.413333525625784, 
0.401846991077651, 0.390296873129726, 0.37868499933275, 0.367013207008966, 
0.355283342961393, 0.343497263181624, 0.331656832556139, 0.319763924571245, 
0.307820421016627, 0.295828211687602, 0.283789194086097, 0.271705273120412, 
0.259578360803816, 0.247410375952002, 0.23520324387949, 0.222958896094977, 
0.210679269995727, 0.198366308561012, 0.186021960044692, 0.17364817766693, 
0.161246919305152, 0.148820147184249, 0.1363698275661, 0.123897930438455, 
0.111406429203228, 0.0988973003642498, 0.0863725232145285, 0.0738340795230721, 
0.0612839532213157, 0.0487241300892125, 0.0361565974410185, 0.0235833438108574, 
0.0110063586380643, -0.00157236804758488, -0.0141508459407623, 
-0.026727084775505, -0.0392990946401314, -0.051864886292101, 
-0.0644224714727681, -0.0769698632219792, -0.0895050761924664, 
-0.102026126963985, -0.114531034357141, -0.127017819746879, -0.139484507375545, 
-0.151929124665516, -0.164349702531306, -0.176744275691142, -0.189110882977916, 
-0.201447567649505, -0.213752377698376, -0.226023366160449, -0.238258591423165, 
-0.250456117532698, -0.262614014500282, -0.274730358607582, -0.286803232711091, 
-0.29883072654546, -0.310810937025771, -0.322741968548649, -0.334621933292202, 
-0.346448951514724, -0.358221151852127, -0.369936671614043, -0.381593657078548, 
-0.393190263785479, -0.404724656828273, -0.416195011144308, -0.427599511803669, 
-0.438936354296331, -0.450203744817673, -0.461399900552317, -0.472523049956212, 
-0.483571433036944, -0.494543301632219, -0.505436919686465, -0.516250563525529, 
-0.526982522129409, -0.537631097402988, -0.54819460444471, -0.558671371813192, 
-0.569059741791683, -0.579358070650367, -0.589564728906439, -0.599678101581945, 
-0.609696588459307, -0.619618604334529, -0.629442579268016, -0.639166958832985, 
-0.648790204361417, -0.658310793187519, -0.667727218888649, -0.677037991523676, 
-0.686241637868734, -0.695336701650318, -0.704321743775716, -0.71319534256071, 
-0.721956093954525, -0.730602611761989, -0.739133527862871, -0.747547492428353, 
-0.755843174134612, -0.764019260373469, -0.772074457460086, -0.780007490837658, 
-0.787817105279087, -0.79550206508559, -0.803061154282226, -0.810493176810292, 
-0.817796956716578, -0.82497133833943, -0.832015186491614, -0.838927386639927, 
-0.845706845081556, -0.852352489117124, -0.858863267220426, -0.865238149204808, 
-0.871476126386172, -0.877576211742578, -0.883537440070415, -0.88935886813713, 
-0.895039574830468, -0.900578661304218, -0.90597525112044, -0.911228490388136, 
-0.916337547898363, -0.921301615255754, -0.926119907006426, -0.930791660762262, 
-0.935316137321543, -0.939692620785908, -0.943920418673633, -0.947998862029195, 
-0.951927305529126, -0.955705127584117, -0.95933173043737, -0.962806540259184, 
-0.966129007237748, -0.969298605666135, -0.972314834025489, -0.975177215064372, 
-0.977885295874285, -0.980438647961327, -0.982836867313995, -0.985079574467111, 
-0.987166414561866, -0.989097057401961, -0.990871197505864, -0.992488554155135, 
-0.993948871438852, -0.995251918294099, -0.996397488542527, -0.997385400922976, 
-0.998215499120161, -0.998887651789398, -0.999401752577391, -0.999757720139061, 
-0.999955498150411, -0.999995055317446, -0.999876385381118, -0.999599507118322, 
-0.999164464338918, -0.998571325878806, -0.997820185589031, -0.996911162320932, 
-0.99584439990734, -0.994620067139815, -0.993238357741943, -0.991699490338681, 
-0.990003708421764, -0.98815128031118, -0.986142499112711, -0.983977682671561, 
-0.981657173522058, -0.979181338833458, -0.976550570351849, -0.973765284338167, 
-0.970825921502328, -0.967732946933499, -0.964486850026507, -0.961088144404403, 
-0.957537367837191, -0.95383508215674, -0.949981873167887, -0.945978350555742, 
-0.941825147789225, -0.937522922020828, -0.933072353982637, -0.928474147878626, 
-0.923729031273223, -0.918837754976196, -0.913801092923853, -0.908619842056582, 
-0.903294822192752, -0.897826875898999, -0.892216868356904, -0.886465687226099, 
-0.880574242503815, -0.874543466380894, -0.868374313094293, -0.862067758776091, 
-0.855624801299047, -0.849046460118698, -0.842333776112062, -0.835487811412937, 
-0.828509649243842, -0.821400393744625, -0.814161169797753, -0.806793122850324, 
-0.79929741873283, -0.791675243474686, -0.783927803116566, -0.776056323519579, 
-0.7680620501713, -0.759946247988698, -0.751710201117993, -0.74335521273147, 
-0.734882604821276, -0.726293717990247, -0.717589911239788, -0.708772561754838, 
-0.699843064685965, -0.690802832928611, -0.681653296899533, -0.672395904310473, 
-0.663032119939087, -0.653563425397179, -0.643991318896268, -0.634317315010528, 
-0.624542944437139, -0.614669753754093, -0.604699305175476, -0.594633176304287, 
-0.584472959882815, -0.574220263540624, -0.563876709540178, -0.553443934520158, 
-0.542923589236499, -0.532317338301192, -0.521626859918898, -0.510853845621409, 
-0.5, -0.489067040435717, -0.478056696827636, -0.466970711319148, 
-0.455810838022302, -0.444578842740253, -0.433276502687869, -0.421905606210519, 
-0.410467952501114, -0.398965351315416, -0.387399622685693, -0.375772596632732, 
-0.364086112876284, -0.352342020543965, -0.340542177878674, -0.328688451944569, 
-0.316782718331643, -0.304826860858954, -0.292822771276551, -0.280772348966149, 
-0.268677500640594, -0.256540140042165, -0.244362187639767, -0.232145570325062, 
-0.219892221107578, -0.207604078808855, -0.19528308775567, -0.182931197472387, 
-0.17055036237249, -0.158142541449341, -0.145709697966212, -0.13325379914564, 
-0.120776815858161, -0.108280722310462, -0.0957674957330039, 
-0.0832391160671728, -0.0706975656519948, -0.058144828910476, 
-0.0455828920356115, -0.0330137426761139, -0.0204393696219119, 
-0.00786176248946867, 0.00471708859303156, 0.0172951933005768, 
0.0298705614262525, 0.0424412031961485, 0.0550051295841932, 0.0675603526268784, 
0.080104885737807, 0.0926367440220272, 0.105153944590098, 0.117654506871838, 
0.130136452929707, 0.14259780777177, 0.155036599664197, 0.167450860443246, 
0.179838625826679, 0.192197935724572, 0.204526834549451, 0.216823371525719, 
0.22908560099833, 0.241311582740639, 0.253499382261405, 0.265647071110876, 
0.27775272718593, 0.289814435034201, 0.301830286157156, 0.313798379312078, 
0.32571682081289, 0.337583724829792, 0.34939721368765, 0.361155418163101, 
0.372856477780309, 0.384498541105349, 0.396079766039157, 0.407598320108996, 
0.41905238075841, 0.430440135635598, 0.441759782880183, 0.453009531408314, 
0.464187601196066, 0.475292223561089, 0.486321641442466, 0.497274109678723, 
0.508147895283969, 0.518941277722096, 0.52965254917902, 0.540280014832907, 
0.550821993122334, 0.561276816012365, 0.571642829258478, 0.581918392668315, 
0.592101880361201, 0.602191681025409, 0.612186198173113, 0.622083850392996, 
0.631883071600472, 0.641582311285488, 0.651180034757856, 0.660674723390081, 
0.670064874857657, 0.67934900337677, 0.688525639939392, 0.697593332545723, 
0.706550646433932, 0.715396164307182, 0.72412848655788, 0.732746231489139, 
0.7412480355334, 0.749632553468183, 0.757898458628941, 0.766044443118978, 
0.774069218016391, 0.781971513578013, 0.789750079440326, 0.797403684817299, 
0.804931118695135, 0.812331190023886, 0.819602727905911, 0.826744581781146, 
0.833755621609151, 0.840634738047918, 0.847380842629396, 0.853992867931721, 
0.860469767748108, 0.866810517252393, 0.873014113161188, 0.879079573892629, 
0.885005939721687, 0.890792272932028, 0.896437657964381, 0.901941201561409, 
0.907302032909044, 0.912519303774276, 0.917592188639366, 0.922519884832469, 
0.927301612654632, 0.931936615503174, 0.936424159991392, 0.940763536064611, 
0.944954057112528, 0.948995060077859, 0.952885905561247, 0.956625977922438, 
0.960214685377689, 0.963651460093409, 0.966935758275998, 0.970067060257901, 
0.973044870579824, 0.975868718069136, 0.97853815591442, 0.981052761736168, 
0.983412137653619, 0.985615910347708, 0.987663731120143, 0.989555275948572, 
0.991290245537855, 0.992868365367424, 0.994289385734713, 0.995553081794674, 
0.996659253595353, 0.997607726109523, 0.998398349262383, 0.999030997955304, 
0.999505572085622, 0.999821996562473, 0.999980221318683, 0.999980221318683, 
0.999821996562473, 0.999505572085622, 0.999030997955304, 0.998398349262383, 
0.997607726109523, 0.996659253595353, 0.995553081794675, 0.994289385734713, 
0.992868365367424, 0.991290245537855, 0.989555275948572, 0.987663731120143, 
0.985615910347709, 0.983412137653619, 0.981052761736168, 0.97853815591442, 
0.975868718069136, 0.973044870579824, 0.970067060257901, 0.966935758275998, 
0.963651460093409, 0.96021468537769, 0.956625977922438, 0.952885905561247, 
0.948995060077859, 0.944954057112528, 0.940763536064611, 0.936424159991393, 
0.931936615503174, 0.927301612654633, 0.922519884832469, 0.917592188639367, 
0.912519303774276, 0.907302032909044, 0.90194120156141, 0.896437657964382, 
0.890792272932029, 0.885005939721688, 0.879079573892629, 0.873014113161188, 
0.866810517252393, 0.860469767748108, 0.853992867931721, 0.847380842629397, 
0.840634738047918, 0.833755621609152, 0.826744581781147, 0.819602727905912, 
0.812331190023886, 0.804931118695135, 0.797403684817299, 0.789750079440326, 
0.781971513578013, 0.774069218016391, 0.766044443118979, 0.757898458628942, 
0.749632553468183, 0.7412480355334, 0.73274623148914, 0.72412848655788, 
0.715396164307182, 0.706550646433933, 0.697593332545723, 0.688525639939393, 
0.67934900337677, 0.670064874857658, 0.660674723390082, 0.651180034757856, 
0.641582311285489, 0.631883071600472, 0.622083850392996, 0.612186198173114, 
0.60219168102541, 0.592101880361201, 0.581918392668315, 0.571642829258479, 
0.561276816012366, 0.550821993122334, 0.540280014832908, 0.529652549179021, 
0.518941277722097, 0.50814789528397, 0.497274109678724, 0.486321641442467, 
0.47529222356109, 0.464187601196066, 0.453009531408314, 0.441759782880184, 
0.430440135635599, 0.419052380758411, 0.407598320108997, 0.396079766039158, 
0.38449854110535, 0.372856477780309, 0.361155418163102, 0.349397213687651, 
0.337583724829792, 0.325716820812891, 0.313798379312079, 0.301830286157157, 
0.289814435034202, 0.277752727185931, 0.265647071110877, 0.253499382261405, 
0.24131158274064, 0.229085600998331, 0.21682337152572, 0.204526834549451, 
0.192197935724573, 0.17983862582668, 0.167450860443247, 0.155036599664198, 
0.142597807771771, 0.130136452929708, 0.117654506871839, 0.105153944590099, 
0.0926367440220281, 0.0801048857378079, 0.0675603526268793, 0.055005129584194, 
0.0424412031961485, 0.0298705614262534, 0.0172951933005777, 0.00471708859303245, 
-0.00786176248946778, -0.020439369621911, -0.033013742676113, 
-0.0455828920356106, -0.0581448289104751, -0.0706975656519939, 
-0.0832391160671719, -0.095767495733003, -0.108280722310461, 
-0.120776815858161, -0.133253799145639, -0.145709697966211, -0.15814254144934, 
-0.170550362372489, -0.182931197472385, -0.195283087755669, -0.207604078808855, 
-0.219892221107577, -0.232145570325062, -0.244362187639766, -0.256540140042165, 
-0.268677500640594, -0.280772348966149, -0.292822771276549, -0.304826860858953, 
-0.316782718331642, -0.328688451944568, -0.340542177878672, -0.352342020543964, 
-0.364086112876284, -0.375772596632731, -0.387399622685693, -0.398965351315415, 
-0.410467952501114, -0.421905606210518, -0.433276502687868, -0.444578842740252, 
-0.455810838022301, -0.466970711319147, -0.478056696827636, -0.489067040435716, 
-0.499999999999999, -0.510853845621409, -0.521626859918897, -0.532317338301192, 
-0.542923589236499, -0.553443934520158, -0.563876709540177, -0.574220263540623, 
-0.584472959882814, -0.594633176304286, -0.604699305175474, -0.614669753754092, 
-0.624542944437138, -0.634317315010527, -0.643991318896268, -0.653563425397179, 
-0.663032119939087, -0.672395904310472, -0.681653296899533, -0.69080283292861, 
-0.699843064685965, -0.708772561754837, -0.717589911239788, -0.726293717990246, 
-0.734882604821275, -0.743355212731469, -0.751710201117993, -0.759946247988698, 
-0.768062050171299, -0.776056323519579, -0.783927803116565, -0.791675243474685, 
-0.799297418732829, -0.806793122850324, -0.814161169797752, -0.821400393744625, 
-0.828509649243841, -0.835487811412936, -0.842333776112062, -0.849046460118697, 
-0.855624801299047, -0.862067758776091, -0.868374313094293, -0.874543466380894, 
-0.880574242503815, -0.886465687226098, -0.892216868356904, -0.897826875898999, 
-0.903294822192752, -0.908619842056581, -0.913801092923853, -0.918837754976196, 
-0.923729031273222, -0.928474147878626, -0.933072353982637, -0.937522922020827, 
-0.941825147789225, -0.945978350555742, -0.949981873167887, -0.95383508215674, 
-0.95753736783719, -0.961088144404403, -0.964486850026507, -0.967732946933499, 
-0.970825921502328, -0.973765284338167, -0.976550570351849, -0.979181338833458, 
-0.981657173522058, -0.983977682671561, -0.986142499112711, -0.988151280311179, 
-0.990003708421764, -0.991699490338681, -0.993238357741943, -0.994620067139815, 
-0.99584439990734, -0.996911162320932, -0.997820185589031, -0.998571325878806, 
-0.999164464338918, -0.999599507118322, -0.999876385381118, -0.999995055317446, 
-0.999955498150411, -0.999757720139061, -0.999401752577391, -0.998887651789398, 
-0.998215499120161, -0.997385400922976, -0.996397488542527, -0.995251918294099, 
-0.993948871438852, -0.992488554155135, -0.990871197505864, -0.989097057401962, 
-0.987166414561866, -0.985079574467112, -0.982836867313995, -0.980438647961327, 
-0.977885295874285, -0.975177215064372, -0.972314834025489, -0.969298605666135, 
-0.966129007237748, -0.962806540259184, -0.959331730437371, -0.955705127584117, 
-0.951927305529127, -0.947998862029196, -0.943920418673633, -0.939692620785909, 
-0.935316137321543, -0.930791660762262, -0.926119907006427, -0.921301615255754, 
-0.916337547898363, -0.911228490388136, -0.90597525112044, -0.900578661304219, 
-0.895039574830468, -0.889358868137131, -0.883537440070415, -0.877576211742578, 
-0.871476126386173, -0.865238149204809, -0.858863267220426, -0.852352489117125, 
-0.845706845081556, -0.838927386639927, -0.832015186491614, -0.82497133833943, 
-0.817796956716578, -0.810493176810292, -0.803061154282226, -0.79550206508559, 
-0.787817105279088, -0.780007490837659, -0.772074457460087, -0.76401926037347, 
-0.755843174134613, -0.747547492428354, -0.739133527862871, -0.730602611761989, 
-0.721956093954525, -0.713195342560711, -0.704321743775717, -0.695336701650319, 
-0.686241637868734, -0.677037991523677, -0.667727218888649, -0.65831079318752, 
-0.648790204361418, -0.639166958832986, -0.629442579268016, -0.619618604334529, 
-0.609696588459308, -0.599678101581945, -0.58956472890644, -0.579358070650367, 
-0.569059741791685, -0.558671371813192, -0.548194604444711, -0.537631097402988, 
-0.526982522129411, -0.516250563525529, -0.505436919686466, -0.49454330163222, 
-0.483571433036944, -0.472523049956213, -0.461399900552317, -0.450203744817674, 
-0.438936354296331, -0.42759951180367, -0.416195011144308, -0.404724656828275, 
-0.39319026378548, -0.38159365707855, -0.369936671614044, -0.358221151852127, 
-0.346448951514724, -0.334621933292202, -0.32274196854865, -0.310810937025771, 
-0.298830726545461, -0.286803232711091, -0.274730358607584, -0.262614014500282, 
-0.2504561175327, -0.238258591423166, -0.226023366160451, -0.213752377698376, 
-0.201447567649505, -0.189110882977917, -0.176744275691142, -0.164349702531307, 
-0.151929124665516, -0.139484507375547, -0.127017819746879, -0.114531034357142, 
-0.102026126963985, -0.0895050761924682, -0.0769698632219801, 
-0.0644224714727698, -0.0518648862921019, -0.0392990946401314, 
-0.0267270847755059, -0.0141508459407623, -0.00157236804758577, 
0.0110063586380643, 0.0235833438108556, 0.0361565974410185, 0.0487241300892107, 
0.0612839532213157, 0.0738340795230703, 0.0863725232145276, 0.0988973003642481, 
0.111406429203227, 0.123897930438455, 0.136369827566099, 0.148820147184249, 
0.161246919305151, 0.17364817766693, 0.186021960044691, 0.198366308561012, 
0.210679269995725, 0.222958896094977, 0.235203243879488, 0.247410375952002, 
0.259578360803814, 0.271705273120412, 0.283789194086097, 0.295828211687601, 
0.307820421016627, 0.319763924571244, 0.331656832556139, 0.343497263181622, 
0.355283342961393, 0.367013207008964, 0.378684999332749, 0.390296873129724, 
0.40184699107765, 0.413333525625782, 0.424754659284047, 0.436108584910611, 
0.447393505997826, 0.458607636956491, 0.46974920339837, 0.480816442416964, 
0.49180760286644, 0.502720945638721, 0.51355474393865, 0.524307283557231, 
0.53497686314285, 0.545561794470491, 0.556060402708846, 0.566471026685333, 
0.57679201914893, 0.587021747030818, 0.597158591702786, 0.607200949233331, 
0.617147230641455, 0.626995862148077, 0.63674528542506, 0.646393957841768, 
0.655940352709167, 0.665382959521378, 0.674720284194692, 0.683950849303964, 
0.693073194316396, 0.702085875822622, 0.710987467765101, 0.719776561663763, 
0.72845176683886, 0.737011710631021, 0.745455038618435, 0.753780414831169, 
0.761986521962544, 0.770072061577581, 0.778035754318438, 0.785876340106854, 
0.793592578343514, 0.801183248104357, 0.808647148333755, 0.815983098034554, 
0.823189936454945, 0.83026652327212, 0.83721173877271, 0.84402448402995, 
0.850703681077561, 0.857248273080316, 0.86365722450126, 0.869929521265559, 
0.876064170920958, 0.882060202794811, 0.887916668147672, 0.893632640323412, 
0.899207214895836, 0.904639509811798, 0.909928665530756, 0.915073845160786, 
0.920074234590991, 0.924929042620325, 0.929637501082777, 0.934198864968919, 
0.938612412543789, 0.942877445461084, 0.946993288873663, 0.950959291540325, 
0.954774825928853, 0.958439288315308, 0.961952098879555, 0.965312701797003, 
0.96852056532656, 0.97157518189476, 0.974476068176083, 0.977222765169425, 
0.979814838270729, 0.982251877341748, 0.984533496774942, 0.986659335554492, 
0.988629057313423, 0.990442350386824, 0.992098927861168, 0.993598527619703, 
0.994940912383929, 0.996125869751143, 0.997153212228046, 0.998022777260411, 
0.9987344272588, 0.99928804962034, 0.999683556746534, 0.999920886057125, 
1), alpha = 2000, tau = 0, K = 3, DC = FALSE, init = 0, tol = 0.001)
where 7: do.call(R6Vmd$new, args = args)
where 8: vmd(signal, DC = FALSE, tol = 0.001)

 --- value of length: 5 type: logical ---
[1] FALSE FALSE FALSE FALSE FALSE
 --- function from context --- 
function (x, objnm = deparse(substitute(x))) 
{
    if (is.null(x) || is.na(x)) 
        stop(sprintf("'%s' must not be NULL or NA", objnm), call. = FALSE)
    else invisible(x)
}
<bytecode: 0x5382d60>
<environment: 0x5352510>
 --- function search by body ---
 ----------- END OF FAILURE REPORT -------------- 
Fatal error: length > 1 in coercion to logical
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/data/gannet/ripley/R/packages/tests-LENGTH1/vmd.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:59.54, 72.68 + 9.22