* using log directory ‘/data/gannet/ripley/R/packages/tests-LENGTH1/cwhmisc.Rcheck’ * using R Under development (unstable) (2022-04-26 r82260) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘cwhmisc/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘cwhmisc’ version ‘6.6’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘cwhmisc’ can be installed ... [12s/33s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [24s/66s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... ERROR Running examples in ‘cwhmisc-Ex.R’ failed The error most likely occurred in: > ### Name: cpos > ### Title: Find the position of a substring > ### Aliases: cpos cposV cposR issubstr > ### Keywords: misc character > > ### ** Examples > > cpos(" Baldrian","a",5) # 3 [1] 3 > cpos("Baldrian","B",15) # NA [1] NA > cposR(" Baldabcrian abcf","abc") ----------- FAILURE REPORT -------------- --- failure: length > 1 in coercion to logical --- --- srcref --- : --- package (from environment) --- cwhmisc --- call from context --- inrange(First, restrict) --- call from argument --- !is.na(x) && min(y) <= x --- R stacktrace --- where 1: inrange(First, restrict) where 2: cposR(" Baldabcrian abcf", "abc") --- value of length: 2 type: logical --- [1] TRUE TRUE --- function from context --- function (x, y) (!is.na(x) && min(y) <= x & x <= max(y)) --- function search by body --- Function inrange in namespace cwhmisc has this body. ----------- END OF FAILURE REPORT -------------- Fatal error: length > 1 in coercion to logical * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [15s/47s] OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-LENGTH1/cwhmisc.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 4:13.68, 84.41 + 9.05