* using log directory ‘/data/gannet/ripley/R/packages/tests-LENGTH1/MaskJointDensity.Rcheck’ * using R Under development (unstable) (2022-03-07 r81853) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘MaskJointDensity/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘MaskJointDensity’ version ‘1.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MaskJointDensity’ can be installed ... [17s/45s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [22s/59s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [6s/15s] ERROR Running examples in ‘MaskJointDensity-Ex.R’ failed The error most likely occurred in: > ### Name: density_Rmask > ### Title: Density function > ### Aliases: density_Rmask > > ### ** Examples > > ##---- Should be DIRECTLY executable !! ---- > ##-- ==> Define data, use random, > ##-- or do help(data=index) for the standard data sets. > > y<-rnorm(100, 0,1) > val <- 1 > for(k in 1:8){ + val<- c(val, mean(y^k)) + } > a<- -2 > b<- 2 > Provost<- density_Rmask(val, a,b) ----------- FAILURE REPORT -------------- --- failure: length > 1 in coercion to logical --- --- srcref --- : --- package (from environment) --- MaskJointDensity --- call from context --- fY_Rmask(yseq[jseq], moments, a, b) --- call from argument --- (y < a) || (y > b) --- R stacktrace --- where 1: fY_Rmask(yseq[jseq], moments, a, b) where 2: mean(fY_Rmask(yseq[jseq], moments, a, b)) where 3: density_Rmask(val, a, b) --- value of length: 2 type: logical --- [1] FALSE FALSE --- function from context --- function (y, muY, a, b) { x <- (2 * y - (a + b))/(b - a) muX <- calc_muX(muY, a, b) SUM <- 0 * y for (k in 0:(length(muY) - 1)) SUM <- SUM + lambda_Rmask(muX, k) * P_Rmask(x, k) SUM[(y < a) || (y > b)] <- 0 val <- SUM * 2/(b - a) val[is.na(val)] <- 0 return(val) } --- function search by body --- Function fY_Rmask in namespace MaskJointDensity has this body. ----------- END OF FAILURE REPORT -------------- Fatal error: length > 1 in coercion to logical * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-LENGTH1/MaskJointDensity.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 6:30.24, 139.65 + 12.38