* using log directory ‘/Users/ripley/R/packages/tests-Accelerate/tsDyn.Rcheck’ * using R Under development (unstable) (2023-09-17 r85158) * using platform: aarch64-apple-darwin22.6.0 * R was compiled by Apple clang version 15.0.0 (clang-1500.0.40.1) GNU Fortran (GCC) 12.2.0 * running under: macOS Ventura 13.5.2 * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘tsDyn/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘tsDyn’ version ‘11.0.4’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘tsDyn’ can be installed ... OK * used C compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’ * used SDK: ‘MacOSX14.0.sdk’ * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s/11s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... NOTE Objects in \usage without \alias in documentation object 'nlar.struct': ‘getNUsed’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘00SetarAndFriends.R’ Comparing ‘00SetarAndFriends.Rout’ to ‘00SetarAndFriends.Rout.save’ ... OK Running ‘GIRF_TEST.R’ Comparing ‘GIRF_TEST.Rout’ to ‘GIRF_TEST.Rout.save’ ... OK Running ‘TVAR_TEST.R’ Comparing ‘TVAR_TEST.Rout’ to ‘TVAR_TEST.Rout.save’ ... OK Running ‘TVECM.sim.R’ Comparing ‘TVECM.sim.Rout’ to ‘TVECM.sim.Rout.save’ ... OK Running ‘TVECM_HSTEST.R’ Comparing ‘TVECM_HSTEST.Rout’ to ‘TVECM_HSTEST.Rout.save’ ... OK Running ‘VAR_TEST.R’ Comparing ‘VAR_TEST.Rout’ to ‘VAR_TEST.Rout.save’ ... OK Running ‘VECM_TEST.R’ Comparing ‘VECM_TEST.Rout’ to ‘VECM_TEST.Rout.save’ ... OK Running ‘compare_tsDyn_vars.R’ Comparing ‘compare_tsDyn_vars.Rout’ to ‘compare_tsDyn_vars.Rout.save’ ...119c119 < [4,] "Component \"U\": Mean relative difference: 0.03872392" --- > [4,] "Component \"U\": Mean relative difference: 0.03872391" Running ‘irf_nlVAR_TEST.R’ Comparing ‘irf_nlVAR_TEST.Rout’ to ‘irf_nlVAR_TEST.Rout.save’ ... OK Running ‘irf_nlar_TEST.R’ Running ‘linear_TEST.R’ Comparing ‘linear_TEST.Rout’ to ‘linear_TEST.Rout.save’ ... OK Running ‘lstar_TEST.R’ Running ‘nlVar-methods_TEST.R’ Comparing ‘nlVar-methods_TEST.Rout’ to ‘nlVar-methods_TEST.Rout.save’ ...5210,5257c5210,5213 < [1] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [2] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [3] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [4] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [5] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [6] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [7] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [8] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [9] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [10] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [11] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [12] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [13] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [14] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [15] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [16] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [17] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [18] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [19] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [20] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [21] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [22] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [23] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [24] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [25] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [26] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [27] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [28] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [29] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [30] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [31] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [32] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [33] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [34] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [35] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [36] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [37] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [38] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [39] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [40] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [41] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [42] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [43] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [44] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [45] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [46] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [47] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" < [48] "Component \"model\": Attributes: < Component \"class\": Lengths (3, 4) differ (string compare on first 3) >" --- > [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [16] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [31] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE > [46] TRUE TRUE TRUE Running ‘nlar-methods_TEST.R’ Comparing ‘nlar-methods_TEST.Rout’ to ‘nlar-methods_TEST.Rout.save’ ... OK Running ‘regime.R’ Comparing ‘regime.Rout’ to ‘regime.Rout.save’ ... OK Running ‘setar.sim_TEST.R’ Comparing ‘setar.sim_TEST.Rout’ to ‘setar.sim_TEST.Rout.save’ ...332c332 < [1] "Mean relative difference: 1.003176" --- > [1] TRUE Running ‘setarTest_test.R’ Comparing ‘setarTest_test.Rout’ to ‘setarTest_test.Rout.save’ ... OK Running ‘toMlm.R’ Comparing ‘toMlm.Rout’ to ‘toMlm.Rout.save’ ... OK Running ‘univ_ar_mean.R’ Comparing ‘univ_ar_mean.Rout’ to ‘univ_ar_mean.Rout.save’ ... OK [51s/52s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE See ‘/Users/ripley/R/packages/tests-Accelerate/tsDyn.Rcheck/00check.log’ for details. 115.83 real 104.29 user 9.61 sys