* installing *source* package ‘Hmisc’ ... ** package ‘Hmisc’ successfully unpacked and MD5 sums checked ** libs clang -mtune=native -I/Users/ripley/R/R-clang/include -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -c Hmisc.c -o Hmisc.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c cidxcn.f -o cidxcn.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c cidxcp.f -o cidxcp.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c hoeffd.f -o hoeffd.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c jacklins.f -o jacklins.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c largrec.f -o largrec.o clang -mtune=native -I/Users/ripley/R/R-clang/include -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -c mChoice.c -o mChoice.o mChoice.c:46:12: warning: implicit conversion loses integer precision: 'long' to 'int' [-Wshorten-64-to-32] opt = strtol(begin, &err_chk, 10); ~ ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mChoice.c:66:14: warning: unused variable 't_len' [-Wunused-variable] R_len_t t_len; /* Number of elements in table */ ^ mChoice.c:71:16: warning: unused variable 'k' [-Wunused-variable] int i, j, k, comp, slen; ^ mChoice.c:99:30: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32] slen = strlen(str) + 1; ~ ~~~~~~~~~~~~^~~ mChoice.c:87:16: warning: variable 'nfound' is uninitialized when used here [-Wuninitialized] nfound++; ^~~~~~ mChoice.c:67:20: note: initialize the variable 'nfound' to silence this warning R_len_t nfound; /* count of number of elements of ^ = 0 mChoice.c:167:28: warning: implicit conversion loses integer precision: 'unsigned long' to 'int' [-Wshorten-64-to-32] slen = strlen(str) + 1; ~ ~~~~~~~~~~~~^~~ 6 warnings generated. gfortran-4.2 -mtune=native -fPIC -g -O2 -c maxempr.f -o maxempr.o clang -mtune=native -I/Users/ripley/R/R-clang/include -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -c nstr.c -o nstr.o clang -mtune=native -I/Users/ripley/R/R-clang/include -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -c ranksort.c -o ranksort.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c rcorr.f -o rcorr.o clang -mtune=native -I/Users/ripley/R/R-clang/include -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -Wconversion -Wno-sign-conversion -c string_box.c -o string_box.o gfortran-4.2 -mtune=native -fPIC -g -O2 -c wclosest.f -o wclosest.o clang -mtune=native -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o Hmisc.so Hmisc.o cidxcn.o cidxcp.o hoeffd.o jacklins.o largrec.o mChoice.o maxempr.o nstr.o ranksort.o rcorr.o string_box.o wclosest.o -L/usr/lib/gcc/i686-apple-darwin11/4.2.1/x86_64 -L/usr/lib/gcc/i686-apple-darwin11/4.2.1 -L/usr/lib -lgfortran -L/Users/ripley/R/R-clang/lib -lR -dylib_file libRblas.dylib:/Users/ripley/R/R-clang/lib/libRblas.dylib -Wl,-framework -Wl,CoreFoundation installing to /Users/ripley/R/packages/tests-clang/Hmisc.Rcheck/Hmisc/libs ** R ** inst ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (Hmisc)