Publications
2011
- Delaneau, O., Marchini, J., Zagury, J.F. A linear complexity phasing method for thousands of genomes. Nature Methods 2011 (to appear)
- Howie, B., Marchini, J., Stephens, M. (2011) Genotype Imputation with Thousands of Genomes. G3doi: 10.1534/g3.111.001198
2010
- Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls. Welcome Trust Case-Control Consortium. Nature 464: 713-20 (2010)
- The 1000 Genomes Consortium (2010). A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073
2009
- Howie, B., Donnelly, P., Marchini, J. (2009). A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Assoication Studies. PLoS Genetics 5(6): e1000529[Open Access Article
- Su, Z., Cardin, N., WTCCC, Donnelly, P., Marchini, J. (2009). A Bayesian method for detecting and characterizing allelic heterogeneity and boosting signals in genome-wide association studies. Statistical Science 24(4) 430-450. Supplementary Material
2007
- The Wellcome Trust Case Control Consortium (2007)Genomewide association study of 14,000 cases of seven common diseases and 3,000 shared controls. Nature 447;661-78. PMID: 1755430010.1038/nature05911
- J. Marchini, B. Howie, S. Myers, G. McVean and P. Donnelly (2007) A new multipoint method for genome-wide association studies via imputation of genotypes. Nature Genetics 39 : 906-913 [Free Access PDF][Supplementary Material][News and Views Article]
- Zeggini et al. (2007) Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes. Science. Jun 1;316(5829):1336-41. Epub 2007 Apr 26. (link)
2006
- J. Marchini, D. Cutler, N. Patterson, M. Stephens, E. Eskin, E. Halperin, S. Lin, Z.S. Qin, H.M. Munro, G.R. Abecasis, P. Donnelly, and International HapMap Consortium (2006) A Comparison of Phasing Algorithms for Trios and Unrelated Individuals. Amercan Journal of Human Genetics, 78 437-450 [PDF] [Datasets]
2005
- J. Marchini, P. Donnelly and L. R Cardon (2005)Genome-wide strategies for detecting multiple loci influencing complex diseases. Nature Genetics, 37 413-417 [PDF] [Supplementary Material] [News and Views article]
- The International HapMap Consortium. A haplotype map of the human genome. Nature 437, 1299-1320. 2005. [Abstract] [PDF]
2004
- The International HapMap Consortium (2004). Integrating ethics and science in the International HapMap Project. Nature Reviews Genetics, 5 467-475. [PDF]
- J. Marchini and A. Presanis (2004) Comparing methods of analysing fMRI statistical parametric maps. NeuroImage, 22 (3) 1203-1213
- J. Marchini, L. Cardon, M. Phillips, and P. Donnelly (2004) The effects of human population structure on large genetic association studies. Nature Genetics 36 512 - 517. [PDF]
2003
- The International HapMap Consortium (2003). The international HapMap project. Nature 426 789-796. [PDF]
- Marchini, J. L. and Cardon, L. R., (2003) Discussion of Nicholson et al. (2003) Assessing population differentiation and isolation from single-nucleotide polymorphism data. JRSS(B) 740-1.
- Marchini, J. L. and Smith, S. M., (2003) On bias in the estimation of autocorrelations for fMRI voxel time series analysis. NeuroImage 18: 83-90
- Henry, C. J. K., Lightowler, H. J. and Marchini, J. (2003) Intra-individual variation inresting metabolic rate during the menstrual cycle. British Journal of Nutrition 89, 811-817
2002
- Marchini, J. L. (2002) AnalyzeFMRI: An R package for the exploration and analysis of MRI and fMRI datasets. R News 2 (1): 17-23
2001
- Banks, A. N., Marchini, J. L. and Guilford, T.C. (2001) Resolving navigational conflict: clock-shift experiments with homing pigeons. Proc. Royal Institute Navigation Conference, Oxford.
2000
- Marchini, J. L., and Ripley, B. D., (2000) A New Statistical Approach to Detecting Significant Activation in Functional MRI. NeuroImage 12: 366-380
1997
- Crichton, N. J., Hinde, J. P., and Marchini, J. L., (1997) Models for Diagnosing Chest Pain: Is CART helpful? Statistics in Medicine 16: 717-727
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